Tools installed
| Section | Tool |
|---|---|
| HCA Single-cell | scanpy_integrate_mnn 9a2f72d7dbd2 anndata_ops fe75d2414dc0 scanpy_compute_graph 7779b9dcf040 scanpy_filter_cells 361608369dda scanpy_filter_genes 23d838d1569d scanpy_find_cluster fc4b3b46dc9d scanpy_find_markers 0a8e527d1517 scanpy_find_variable_genes 79da59a0b180 scanpy_integrate_bbknn 9d76c3d6dff6 scanpy_integrate_combat 352cdf3b2f75 scanpy_integrate_harmony 6903bc865d63 scanpy_multiplet_scrublet 70cb0596ffef scanpy_normalise_data 28b1546857b0 scanpy_parameter_iterator d4c9061c8fef scanpy_plot_embed 1be0fc4d8654 scanpy_plot_scrublet 4a74b45c1ce4 scanpy_plot_trajectory d3df472a21dc scanpy_read_10x 287503c35cb4 scanpy_regress_variable d18ed15697bb scanpy_run_diffmap 6a6364b488db scanpy_run_dpt 12f67b0c1a94 scanpy_run_fdg 65c3ec07502b scanpy_run_paga 6d4f88995e40 scanpy_run_pca 0cf90e01d9f8 scanpy_run_tsne 3fb53f5e46ea scanpy_run_umap 767a675b5254 scanpy_scale_data e2d0dc8a50ca |
Tools updated
| Section | Tool |
|---|---|
| Assembly | metaspades 3ca2d2a9068c spades b7829778729f |
| ChemicalToolBox | ambertools_acpype da6bd1975a71 |
| Nanopore | medaka_consensus fa11aa8103b2 medaka_consensus_pipeline 0e9e7fcdd543 medaka_variant 0f5f4a208660 |
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