Tools installed
| Section | Tool |
|---|---|
| FASTQ Quality Control | filtlong 8880fb74ef56 |
| Filter and Sort | seq_filter_by_id 141612f8c3e3 |
| Operate on Genomic Intervals | intersect 33b3f3688db4 |
| Proteomics | uniprotxml_downloader 1a5690a5eedc encyclopedia_encyclopedia d0ea7589e95f encyclopedia_quantify 4081e4faa4ab encyclopedia_walnut ce1a157a41bd openms_msfraggeradapter e133b5c8878f msstats 8212e342e482 |
Tools updated
| Section | Tool |
|---|---|
| Assembly | canu 5732f959936a |
| ChemicalToolBox | enumerate_charges bbbf5fb356dd |
| Convert Formats | thermo_raw_file_converter 92ac8e086317 |
| FASTA/FASTQ | umi_tools_count 8250ea3a1501 umi_tools_extract 6a675c3aa610 |
| Get Data | sra_tools e08a7ad4378b |
| Mapping | minimap2 77b2770508f6 |
| Phylogenetics | roary 78608ec02d62 |
| Proteomics | cardinal_combine 5f066029763e maxquant 37d669de2828 maxquant_mqpar 9cb7dcc07dae metaquantome_db a72ac2c7cc5b metaquantome_expand 990b4560ead7 metaquantome_filter deaf035bbe9f metaquantome_sample c1343e3389ca metaquantome_stat d46d64e7964d metaquantome_viz 9bf325045235 |
| Single-cell | anndata_import ae1e5d9d8972 anndata_inspect 383dcb0500f9 anndata_manipulate 8db95f488f0f |
| Text Manipulation | filter_tabular 6544e4b87a4f sqlite_to_tabular bce29ec10b78 query_tabular 83069b38aa85 |
| VCF/BCF | bcftools_csq fdd127bd4a32 bcftools_consensus d6dc477167f8 |
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